Disease: Carcinoma of lung
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs969129
LOC105374724 ; IL7R
0.851 0.200 5 35861166 intron variant T/A;G snv 4
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs791588
IL2RA
0.851 0.200 10 6047379 intron variant G/T snv 0.40 4
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs767649
MIR155HG ; MIR155
0.695 0.480 21 25572410 intron variant T/A snv 7.5E-02 18
rs763110
FASLG
0.653 0.560 1 172658358 upstream gene variant C/T snv 0.49 30
rs746702110
OGG1
0.627 0.480 3 9756778 missense variant C/T snv 1.2E-05 2.8E-05 38
rs7383287
HLA-DOB
0.851 0.320 6 32815309 synonymous variant A/G snv 0.18 0.19 4
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs62514004
CCN4
0.790 0.240 8 133190246 upstream gene variant A/G snv 0.28 8
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs3817963
TSBP1-AS1 ; BTNL2
0.776 0.360 6 32400310 intron variant T/C snv 0.25 8
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs3219175
RETN
0.807 0.240 19 7668969 upstream gene variant G/A snv 5.0E-02 10
rs3131378
MSH5-SAPCD1 ; MSH5
0.925 0.200 6 31757508 non coding transcript exon variant A/G snv 7.9E-02 2
rs3117582
BAG6 ; APOM
0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02 14
rs3115672
MSH5 ; MSH5-SAPCD1
0.851 0.200 6 31760120 synonymous variant C/T snv 6.4E-02 7.9E-02 4
rs2929973
CCN4
0.851 0.200 8 133230265 3 prime UTR variant G/T snv 0.85 5
rs2929970
CCN4
0.827 0.200 8 133228894 3 prime UTR variant G/A snv 0.52 5
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs2847297
PTPN2
0.827 0.200 18 12797695 intron variant A/G snv 0.40 5